PoplarV1, Main, Exploration, bibRecord, 000C56

Temporal analysis of Arabidopsis genes activated by Eucalyptus grandis NAC transcription factors associated with xylem fibre and vessel development.

Identifieur interne : 000C56 ( Main/Exploration ); précédent : 000C55; suivant : 000C57

Temporal analysis of Arabidopsis genes activated by Eucalyptus grandis NAC transcription factors associated with xylem fibre and vessel development.

Auteurs : M. Laubscher [Afrique du Sud] ; K. Brown [Afrique du Sud] ; L B Tonfack [Cameroun] ; A A Myburg [Afrique du Sud] ; E. Mizrachi [Afrique du Sud] ; S G Hussey [Afrique du Sud]

Source :

Scientific reports [ 2045-2322 ] ; 2018.

RBID : pubmed:30030488

Descripteurs français

KwdFr :
- Activation de la transcription (effets des médicaments et des substances chimiques), Arabidopsis (génétique), Eucalyptus (génétique), Facteurs de transcription (pharmacologie), Facteurs temps (MeSH), Gènes de plante (MeSH), Protéines d'Arabidopsis (MeSH), Protéines végétales (génétique), Régulation de l'expression des gènes végétaux (MeSH), Similitude de séquences d'acides aminés (MeSH), Structures de plante (croissance et développement), Structures de plante (génétique), Xylème (croissance et développement), Xylème (génétique).
MESH :
- croissance et développement : Structures de plante, Xylème.
- effets des médicaments et des substances chimiques : Activation de la transcription.
- génétique : Arabidopsis, Eucalyptus, Protéines végétales, Structures de plante, Xylème.
- pharmacologie : Facteurs de transcription.
- Facteurs temps, Gènes de plante, Protéines d'Arabidopsis, Régulation de l'expression des gènes végétaux, Similitude de séquences d'acides aminés.

English descriptors

KwdEn :
- Arabidopsis (genetics), Arabidopsis Proteins (MeSH), Eucalyptus (genetics), Gene Expression Regulation, Plant (MeSH), Genes, Plant (MeSH), Plant Proteins (genetics), Plant Structures (genetics), Plant Structures (growth & development), Sequence Homology, Amino Acid (MeSH), Time Factors (MeSH), Transcription Factors (pharmacology), Transcriptional Activation (drug effects), Xylem (genetics), Xylem (growth & development).
MESH :
- chemical , genetics : Plant Proteins.
- chemical , pharmacology : Transcription Factors.
- chemical : Arabidopsis Proteins.
- drug effects : Transcriptional Activation.
- genetics : Arabidopsis, Eucalyptus, Plant Structures, Xylem.
- growth & development : Plant Structures, Xylem.
- Gene Expression Regulation, Plant, Genes, Plant, Sequence Homology, Amino Acid, Time Factors.

Abstract

Secondary cell wall (SCW) deposition in Arabidopsis is regulated among others by NAC transcription factors, where SND1 chiefly initiates xylem fibre differentiation while VND6 controls metaxylem vessel SCW development, especially programmed cell death and wall patterning. The translational relevance of Arabidopsis SCW regulation theory and the utility of characterized transcription factors as modular synthetic biology tools for improving commercial fibre crops is unclear. We investigated inter-lineage gene activation dynamics for potential fibre and vessel differentiation regulators from the widely grown hardwood Eucalyptus grandis (Myrtales). EgrNAC26, a VND6 homolog, and EgrNAC61, an SND1 homolog, were transiently expressed in Arabidopsis mesophyll protoplasts in parallel to determine early and late (i.e. 7 and 14 hours post-transfection) gene targets. Surprisingly, across the time series EgrNAC26 activated only a subset of SCW-related transcription factors and biosynthetic genes activated by EgrNAC61, specializing instead in targeting vessel-specific wall pit and programmed cell death markers. Promoters of EgrNAC26 and EgrNAC61 both induced reporter gene expression in vessels of young Arabidopsis plants, with EgrNAC61 also conferring xylem- and cork cambium-preferential expression in Populus. Our results demonstrate partial conservation, with notable exceptions, of SND1 and VND6 homologs in Eucalyptus and a first report of cork cambium expression for EgrNAC61.

DOI: 10.1038/s41598-018-29278-w
PubMed: 30030488
PubMed Central: PMC6054625

Affiliations:

Afrique du Sud, Cameroun

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000D36
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Le document en format XML

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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Arabidopsis (genetics)</term>
<term>Arabidopsis Proteins (MeSH)</term>
<term>Eucalyptus (genetics)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Genes, Plant (MeSH)</term>
<term>Plant Proteins (genetics)</term>
<term>Plant Structures (genetics)</term>
<term>Plant Structures (growth & development)</term>
<term>Sequence Homology, Amino Acid (MeSH)</term>
<term>Time Factors (MeSH)</term>
<term>Transcription Factors (pharmacology)</term>
<term>Transcriptional Activation (drug effects)</term>
<term>Xylem (genetics)</term>
<term>Xylem (growth & development)</term>
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<term>Eucalyptus (génétique)</term>
<term>Facteurs de transcription (pharmacologie)</term>
<term>Facteurs temps (MeSH)</term>
<term>Gènes de plante (MeSH)</term>
<term>Protéines d'Arabidopsis (MeSH)</term>
<term>Protéines végétales (génétique)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Similitude de séquences d'acides aminés (MeSH)</term>
<term>Structures de plante (croissance et développement)</term>
<term>Structures de plante (génétique)</term>
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<term>Protéines d'Arabidopsis</term>
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<front><div type="abstract" xml:lang="en">Secondary cell wall (SCW) deposition in Arabidopsis is regulated among others by NAC transcription factors, where SND1 chiefly initiates xylem fibre differentiation while VND6 controls metaxylem vessel SCW development, especially programmed cell death and wall patterning. The translational relevance of Arabidopsis SCW regulation theory and the utility of characterized transcription factors as modular synthetic biology tools for improving commercial fibre crops is unclear. We investigated inter-lineage gene activation dynamics for potential fibre and vessel differentiation regulators from the widely grown hardwood Eucalyptus grandis (Myrtales). EgrNAC26, a VND6 homolog, and EgrNAC61, an SND1 homolog, were transiently expressed in Arabidopsis mesophyll protoplasts in parallel to determine early and late (i.e. 7 and 14 hours post-transfection) gene targets. Surprisingly, across the time series EgrNAC26 activated only a subset of SCW-related transcription factors and biosynthetic genes activated by EgrNAC61, specializing instead in targeting vessel-specific wall pit and programmed cell death markers. Promoters of EgrNAC26 and EgrNAC61 both induced reporter gene expression in vessels of young Arabidopsis plants, with EgrNAC61 also conferring xylem- and cork cambium-preferential expression in Populus. Our results demonstrate partial conservation, with notable exceptions, of SND1 and VND6 homologs in Eucalyptus and a first report of cork cambium expression for EgrNAC61.</div>
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<Abstract><AbstractText>Secondary cell wall (SCW) deposition in Arabidopsis is regulated among others by NAC transcription factors, where SND1 chiefly initiates xylem fibre differentiation while VND6 controls metaxylem vessel SCW development, especially programmed cell death and wall patterning. The translational relevance of Arabidopsis SCW regulation theory and the utility of characterized transcription factors as modular synthetic biology tools for improving commercial fibre crops is unclear. We investigated inter-lineage gene activation dynamics for potential fibre and vessel differentiation regulators from the widely grown hardwood Eucalyptus grandis (Myrtales). EgrNAC26, a VND6 homolog, and EgrNAC61, an SND1 homolog, were transiently expressed in Arabidopsis mesophyll protoplasts in parallel to determine early and late (i.e. 7 and 14 hours post-transfection) gene targets. Surprisingly, across the time series EgrNAC26 activated only a subset of SCW-related transcription factors and biosynthetic genes activated by EgrNAC61, specializing instead in targeting vessel-specific wall pit and programmed cell death markers. Promoters of EgrNAC26 and EgrNAC61 both induced reporter gene expression in vessels of young Arabidopsis plants, with EgrNAC61 also conferring xylem- and cork cambium-preferential expression in Populus. Our results demonstrate partial conservation, with notable exceptions, of SND1 and VND6 homologs in Eucalyptus and a first report of cork cambium expression for EgrNAC61.</AbstractText>
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Temporal analysis of Arabidopsis genes activated by Eucalyptus grandis NAC transcription factors associated with xylem fibre and vessel development.

Temporal analysis of Arabidopsis genes activated by Eucalyptus grandis NAC transcription factors associated with xylem fibre and vessel development.

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